weka.classifiers.immune.clonalg
Class CLONALG

java.lang.Object
  weka.classifiers.Classifier
      weka.classifiers.immune.clonalg.CLONALG

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, weka.core.OptionHandler

public class CLONALG
extends weka.classifiers.Classifier
implements weka.core.OptionHandler

Type: CLONALG
Date: 19/01/2005

Description:

Author:

Jason Brownlee

See Also:

Serialized Form

Constructor Summary

CLONALG()

Method Summary

java.lang.String	antibodyPoolSizeTipText()
void	buildClassifier(weka.core.Instances data)
double	classifyInstance(weka.core.Instance instance)
java.lang.String	clonalFactorTipText()
int	getAntibodyPoolSize()
double	getClonalFactor()
int	getNumGenerations()
java.lang.String[]	getOptions()
double	getRemainderPoolRatio()
long	getSeed()
int	getSelectionPoolSize()
int	getTotalReplacement()
java.lang.String	globalInfo()
java.util.Enumeration	listOptions()
static void	main(java.lang.String[] argv)
java.lang.String	numGenerationsTipText()
java.lang.String	remainderPoolRatioTipText()
java.lang.String	seedTipText()
java.lang.String	selectionPoolSizeTipText()
void	setAntibodyPoolSize(int antibodyPoolSize)
void	setClonalFactor(double clonalFactor)
void	setNumGenerations(int numGenerations)
void	setOptions(java.lang.String[] options)
void	setRemainderPoolRatio(double remainder)
void	setSeed(long seed)
void	setSelectionPoolSize(int selectionPoolSize)
void	setTotalReplacement(int totalReplacement)
java.lang.String	toString()
java.lang.String	totalReplacementTipText()

Methods inherited from class weka.classifiers.Classifier

debugTipText, distributionForInstance, forName, getDebug, makeCopies, makeCopy, setDebug

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

CLONALG

public CLONALG()

Method Detail

buildClassifier

public void buildClassifier(weka.core.Instances data)
                     throws java.lang.Exception

Specified by:

buildClassifier in class weka.classifiers.Classifier

Throws:

java.lang.Exception

classifyInstance

public double classifyInstance(weka.core.Instance instance)
                        throws java.lang.Exception

Overrides:

classifyInstance in class weka.classifiers.Classifier

Throws:

java.lang.Exception

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

globalInfo

public java.lang.String globalInfo()

listOptions

public java.util.Enumeration listOptions()

Specified by:

listOptions in interface weka.core.OptionHandler

Overrides:

listOptions in class weka.classifiers.Classifier

setOptions

public void setOptions(java.lang.String[] options)
                throws java.lang.Exception

Specified by:

setOptions in interface weka.core.OptionHandler

Overrides:

setOptions in class weka.classifiers.Classifier

Throws:

java.lang.Exception

getOptions

public java.lang.String[] getOptions()

Specified by:

getOptions in interface weka.core.OptionHandler

Overrides:

getOptions in class weka.classifiers.Classifier

clonalFactorTipText

public java.lang.String clonalFactorTipText()

antibodyPoolSizeTipText

public java.lang.String antibodyPoolSizeTipText()

selectionPoolSizeTipText

public java.lang.String selectionPoolSizeTipText()

totalReplacementTipText

public java.lang.String totalReplacementTipText()

numGenerationsTipText

public java.lang.String numGenerationsTipText()

seedTipText

public java.lang.String seedTipText()

remainderPoolRatioTipText

public java.lang.String remainderPoolRatioTipText()

getAntibodyPoolSize

public int getAntibodyPoolSize()

Returns:

Returns the antibodyPoolSize.

setAntibodyPoolSize

public void setAntibodyPoolSize(int antibodyPoolSize)

Parameters:

antibodyPoolSize - The antibodyPoolSize to set.

getClonalFactor

public double getClonalFactor()

Returns:

Returns the clonalFactor.

setClonalFactor

public void setClonalFactor(double clonalFactor)

Parameters:

clonalFactor - The clonalFactor to set.

getNumGenerations

public int getNumGenerations()

Returns:

Returns the numGenerations.

setNumGenerations

public void setNumGenerations(int numGenerations)

Parameters:

numGenerations - The numGenerations to set.

getRemainderPoolRatio

public double getRemainderPoolRatio()

Returns:

Returns the remainderPoolRatio.

setRemainderPoolRatio

public void setRemainderPoolRatio(double remainder)

Parameters:

repertoirePoolRatio - The repertoirePoolRatio to set.

getSeed

public long getSeed()

Returns:

Returns the seed.

setSeed

public void setSeed(long seed)

Parameters:

seed - The seed to set.

getSelectionPoolSize

public int getSelectionPoolSize()

Returns:

Returns the selectionPoolSize.

setSelectionPoolSize

public void setSelectionPoolSize(int selectionPoolSize)

Parameters:

selectionPoolSize - The selectionPoolSize to set.

getTotalReplacement

public int getTotalReplacement()

Returns:

Returns the totalReplacement.

setTotalReplacement

public void setTotalReplacement(int totalReplacement)

Parameters:

totalReplacement - The totalReplacement to set.

main

public static void main(java.lang.String[] argv)